CDS

Accession Number TCMCG006C01772
gbkey CDS
Protein Id XP_022574868.1
Location join(4433776..4433937,4434173..4434680,4434782..4434921,4435002..4435039,4435254..4435332,4435445..4435879,4436248..4436331,4436998..4437138,4437280..4437386,4437525..4437645,4437912..4438049,4438218..4438364,4438592..4438714,4438888..4439145)
Gene LOC111215544
GeneID 111215544
Organism Brassica napus

Protein

Length 826aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022719147.1
Definition pre-mRNA-processing protein 40C-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category K
Description pre-mRNA-processing protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12824        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
ko04212        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
map04212        [VIEW IN KEGG]
GOs GO:0000122        [VIEW IN EMBL-EBI]
GO:0001085        [VIEW IN EMBL-EBI]
GO:0001103        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003712        [VIEW IN EMBL-EBI]
GO:0003713        [VIEW IN EMBL-EBI]
GO:0003714        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008134        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070491        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAGGGGAGAATGTCACGGAGCCGTTGAATACAGCGGCGCCATCTACGGGAGAGAGTATCTTCGCCACAGCTCCTCCTCCAAGTGATTCAGTATTGGCCACTGCTGCTTCGAGTATCTCTCCAAGCAGTAAATCTCAGCCGGAGCAATCCTCTATGTCTATTGCCACTACTGCGCAATTGAGTGCTAATGCAGCAGCCTCCTCAATTGCTAATCCCATACCTCAAGCTTCGCATATGCTACAGAATCCGCCTTTTGGTCGACCAGGAACACTCGCTCCTCCTGGACTCATGACATCGCCGCCTGCTTTTCCTGGTTCCAACCCTTTCTCCACAATTCCAAGACCCGGGGGTCCTGCTCAAATCAATCCTGGTGTTCATCCACACATGTATCCTCCTTATCATTCTCTGCCGCCAATGCATGGAACGCCTCAAGGAATGTGGCTGCAGCCTCCCCCTATGGGTGGTATCCCCAGGGCGCATTTCCCATCACATCCTACTCCTTTTCCTGGTAATTACCCATTTCCAGTTCGCGGAGCTTCTTCTCACCTGCCATATCCTGGTTCTCAACCGCTTCCTGTGGGGAATGCTGGCACTGTTCATGCGTTACCGGGTCACCAACCGTTAGATGTTCCTCCTGGTCAAAAGCCAGAAACACTCTCAGGAATTGATGACAGAGCTGGTTCTCAACTAGTAGGAAATCGAGTAGATGCCTGGACTGCACATAAATCAGAAACAGGAGTTGTTTATTATTATAACTCGGTTACAGGGCAATCGACCTATGAAAAGCCTCCTGGTTTTGAAAGGGAGCCTGATAAAGTGCCGGTGCAGCCAATTCCTATCTCTATGGAGAATATACATGGGACGGATTGGGCTCTTGTTTCCACAAATGATGGCAAAAAATATTACTACAACAATAAAACAAAGGTAAGTAGCTGGCAGATTCCACCTGAGGTGAAAGATTTGGTGAAGAAAACGGAGGAGAGGTCAACGGAGAGTTTAGCTTCTGTGCCGAGCGCTGATTTAACTGAAAAGGGTTCTGAGCAATCAAGTTTGAGCGCACCTGCTATTAACAATGGTGGCCGGGATGCCGTATCGCTCAGAACTACAATTGTTCCTGGTTTCTCAGCGTTGGATTTGGTCAAAAAGAAACTGCATGATTCTGGAGTTCCTGTCTCCTCTACGACAACATCTGAAGCAAATGGTGGTAAAGCAAACGAGGTCACACCTAGTGGAGAGAGTGGAGATGGTATGGGCAAGGTAAAAGATGCTCCTGGAGGTGGTGACCTTTCTGATTCTACTTCAGATTCCGAAGATGAAGACAGTGGACCATCGAAGGAAGAGTGTATCAAACAGTTTAAGGAAATGCTCAAGGAGAGAGGAGTAGCACCGTTTTCTAAATGGGAGAAGGAACTGCCAAAAATTATCTTTGACCCTCGCTTTAAGGCAATTCAAAGTCATTCTGTTAGAAGATCTTTATTTGAGCAGTACGTAAAGACTCGCGCTGAAGAAGAACGTAGGGAAAAGCGTGCTGCTCATAAGGCAGCTGTTGAAGGTTTCAAGCAGTTGCTGGACGAAGCGTCTAAGGACATTGATAAACACACTGATTATCATACTTTTAAAAAGAAATGGGGAAATGATCTGCGGTTCGAATCACTTGAGCGGAAGGAAAGAGAAGCTTTGCTGAATGAAAGAATCCTTTCTTTGAAACGAGCTGCTGACCAGAAGGCGCAAGAAATCCGCGCAGCAGCAGCCTCTGATTTCAAGACGATGTTACATGAAAGAGAAGTGTCCATAAATTCACATTGGTCCAAGGTAAAGGATAGCCTGAGAAATGATCCAAGATATAGATCTGCTGCACACGAGGACAGGGAGGTCTTTTATAATGAGTACATTGCGGAATTAAAAGCTGCAAGGGGAGATGAGTATGAGATGAAAAGTAGAGGCGAAGAGGATAAACTGAGAGAACGAGAGCGGGAGTTGCGAAAACGGAAAGAAAGAGAAGTGCTAGAGGTGGAAAGGGTACGACAAAAAATCAGAAGGAAAGAGGCAGTTGCCTCTTATCAAGCTTTGCTAGTGGAGAAGATCAGAGACCCTGAGGCATCCTGGACAGAATCGAAGCCGAAACTTGAGAGGGATCCTCAAAAACGCGCCTTAAATCCGGATTTAGATCCTGCTGATAAAGAGAAGCTGTTCCGAGACCATATAAAGACATTGTACGAGAGGTGTGCCCGTGACTTCAAAGCTCTTCTAGTTGAAGTCTTGTCATCGGAAGCTGCTTCTCAGCAGACAGAAGAAGCAAAGACCGTGCTCAACTCTTGGTCGACGGCTAAACAAGTACTCAAATCCGACATCCGATACAGCAAAATGCCCAGAGATGACAGGGAAGTCATATGGCGCCGATATGCGGAAGATATCTTGAGGAAACAGAAACAAGATAGCCCTCAAAAGGAAGATAAACCAAGAGACTACAAGATCTAA
Protein:  
MEGENVTEPLNTAAPSTGESIFATAPPPSDSVLATAASSISPSSKSQPEQSSMSIATTAQLSANAAASSIANPIPQASHMLQNPPFGRPGTLAPPGLMTSPPAFPGSNPFSTIPRPGGPAQINPGVHPHMYPPYHSLPPMHGTPQGMWLQPPPMGGIPRAHFPSHPTPFPGNYPFPVRGASSHLPYPGSQPLPVGNAGTVHALPGHQPLDVPPGQKPETLSGIDDRAGSQLVGNRVDAWTAHKSETGVVYYYNSVTGQSTYEKPPGFEREPDKVPVQPIPISMENIHGTDWALVSTNDGKKYYYNNKTKVSSWQIPPEVKDLVKKTEERSTESLASVPSADLTEKGSEQSSLSAPAINNGGRDAVSLRTTIVPGFSALDLVKKKLHDSGVPVSSTTTSEANGGKANEVTPSGESGDGMGKVKDAPGGGDLSDSTSDSEDEDSGPSKEECIKQFKEMLKERGVAPFSKWEKELPKIIFDPRFKAIQSHSVRRSLFEQYVKTRAEEERREKRAAHKAAVEGFKQLLDEASKDIDKHTDYHTFKKKWGNDLRFESLERKEREALLNERILSLKRAADQKAQEIRAAAASDFKTMLHEREVSINSHWSKVKDSLRNDPRYRSAAHEDREVFYNEYIAELKAARGDEYEMKSRGEEDKLRERERELRKRKEREVLEVERVRQKIRRKEAVASYQALLVEKIRDPEASWTESKPKLERDPQKRALNPDLDPADKEKLFRDHIKTLYERCARDFKALLVEVLSSEAASQQTEEAKTVLNSWSTAKQVLKSDIRYSKMPRDDREVIWRRYAEDILRKQKQDSPQKEDKPRDYKI